Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 AC125634.1-201ENST00000438758 1403 ntBASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 AC011467.2-201ENST00000598425 242 ntBASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 AC063926.2-201ENST00000623766 1308 ntBASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 MEIS3P1-201ENST00000495167 958 ntBASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 AL513210.1-201ENST00000629608 234 ntBASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC168Q8NDH2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 KRT8P50-201ENST00000562022 1438 ntBASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 HCG4B-203ENST00000450128 991 ntBASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 AC006557.2-201ENST00000592985 1240 ntBASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 VN2R19P-201ENST00000442399 1052 ntBASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 DUX4L17-201ENST00000557360 1267 ntBASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC168Q8NDH2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms