Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.39■□□□□ 0.53
LSP1P33241 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.39■□□□□ 0.53
LSP1P33241 CYP2T1P-201ENST00000432607 1285 ntBASIC18.39■□□□□ 0.53
LSP1P33241 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 RPS2P52-201ENST00000469610 820 ntBASIC18.39■□□□□ 0.53
LSP1P33241 AL162430.1-201ENST00000480705 870 ntBASIC18.39■□□□□ 0.53
LSP1P33241 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.39■□□□□ 0.53
LSP1P33241 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.39■□□□□ 0.53
LSP1P33241 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LSP1P33241 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
LSP1P33241 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.39■□□□□ 0.53
LSP1P33241 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.39■□□□□ 0.53
LSP1P33241 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSP1P33241 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.39■□□□□ 0.53
LSP1P33241 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LSP1P33241 KRT18P55-202ENST00000578578 1546 ntBASIC18.39■□□□□ 0.53
LSP1P33241 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LSP1P33241 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 AL355312.1-201ENST00000407115 2176 ntBASIC18.38■□□□□ 0.53
LSP1P33241 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LSP1P33241 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.38■□□□□ 0.53
LSP1P33241 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.38■□□□□ 0.53
LSP1P33241 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.38■□□□□ 0.53
LSP1P33241 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.38■□□□□ 0.53
LSP1P33241 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.38■□□□□ 0.53
LSP1P33241 AC005181.1-201ENST00000604782 1256 ntBASIC18.38■□□□□ 0.53
LSP1P33241 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.38■□□□□ 0.53
LSP1P33241 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LSP1P33241 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LSP1P33241 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LSP1P33241 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.38■□□□□ 0.53
LSP1P33241 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LSP1P33241 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.38■□□□□ 0.53
LSP1P33241 AL138688.1-201ENST00000624851 1594 ntBASIC18.38■□□□□ 0.53
LSP1P33241 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSP1P33241 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LSP1P33241 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.37■□□□□ 0.53
LSP1P33241 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.37■□□□□ 0.53
LSP1P33241 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.37■□□□□ 0.53
LSP1P33241 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.37■□□□□ 0.53
LSP1P33241 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LSP1P33241 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.37■□□□□ 0.53
LSP1P33241 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.37■□□□□ 0.53
LSP1P33241 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LSP1P33241 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.37■□□□□ 0.53
LSP1P33241 AC008694.1-202ENST00000636953 945 ntBASIC18.37■□□□□ 0.53
LSP1P33241 AL596257.1-201ENST00000641463 2694 ntBASIC18.37■□□□□ 0.53
LSP1P33241 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
LSP1P33241 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSP1P33241 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSP1P33241 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms