Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.74■□□□□ 0.91
COL11A1P12107 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.74■□□□□ 0.91
COL11A1P12107 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL11A1P12107 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL11A1P12107 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A1P12107 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.73■□□□□ 0.91
COL11A1P12107 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
COL11A1P12107 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 AL049840.3-201ENST00000602669 611 ntBASIC20.73■□□□□ 0.91
COL11A1P12107 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
COL11A1P12107 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A1P12107 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 AC132938.6-201ENST00000623828 1655 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A1P12107 AC125634.1-201ENST00000438758 1403 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL11A1P12107 RBM17P3-201ENST00000417687 1192 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 PMS2P1-201ENST00000431037 1228 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 ABCD1P5-201ENST00000445663 754 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A1P12107 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.72■□□□□ 0.91
COL11A1P12107 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COL11A1P12107 MTDHP3-201ENST00000594186 672 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.72■□□□□ 0.91
COL11A1P12107 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COL11A1P12107 AC126763.1-201ENST00000552015 2118 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A1P12107 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL11A1P12107 LINC00602-201ENST00000629776 2065 ntBASIC20.72■□□□□ 0.91
COL11A1P12107 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
COL11A1P12107 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A1P12107 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A1P12107 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A1P12107 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A1P12107 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.71■□□□□ 0.91
COL11A1P12107 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 AC012640.2-201ENST00000561606 901 ntBASIC20.71■□□□□ 0.91
COL11A1P12107 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A1P12107 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A1P12107 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A1P12107 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A1P12107 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A1P12107 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A1P12107 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL11A1P12107 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A1P12107 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A1P12107 AC073648.2-201ENST00000510116 352 ntBASIC20.71■□□□□ 0.91
COL11A1P12107 AC009533.2-201ENST00000543664 586 ntBASIC20.71■□□□□ 0.91
COL11A1P12107 MIR5100-201ENST00000579544 119 ntBASIC20.71■□□□□ 0.91
COL11A1P12107 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A1P12107 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A1P12107 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 AC093010.1-201ENST00000473625 1624 ntBASIC20.7■□□□□ 0.9
COL11A1P12107 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A1P12107 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A1P12107 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A1P12107 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A1P12107 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A1P12107 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A1P12107 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.7■□□□□ 0.9
COL11A1P12107 AC011467.2-201ENST00000598425 242 ntBASIC20.7■□□□□ 0.9
COL11A1P12107 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A1P12107 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A1P12107 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A1P12107 AC010460.3-201ENST00000511359 1579 ntBASIC20.7■□□□□ 0.9
COL11A1P12107 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 AL031598.1-201ENST00000561511 1773 ntBASIC20.7■□□□□ 0.9
COL11A1P12107 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A1P12107 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.69■□□□□ 0.9
COL11A1P12107 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.69■□□□□ 0.9
COL11A1P12107 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.69■□□□□ 0.9
COL11A1P12107 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A1P12107 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.69■□□□□ 0.9
COL11A1P12107 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms