Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
P04436 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.72■□□□□ 0.27
P04436 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
P04436 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.72■□□□□ 0.27
P04436 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.72■□□□□ 0.27
P04436 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.72■□□□□ 0.27
P04436 AC090616.6-201ENST00000582640 721 ntBASIC16.72■□□□□ 0.27
P04436 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.72■□□□□ 0.27
P04436 AC092329.2-201ENST00000598402 547 ntBASIC16.72■□□□□ 0.27
P04436 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.72■□□□□ 0.27
P04436 AL390719.2-201ENST00000606993 987 ntBASIC16.72■□□□□ 0.27
P04436 AC092119.3-201ENST00000612618 583 ntBASIC16.72■□□□□ 0.27
P04436 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P04436 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
P04436 KRT18P1-202ENST00000452408 1331 ntBASIC16.71■□□□□ 0.27
P04436 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.71■□□□□ 0.27
P04436 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
P04436 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
P04436 SDHAP2-201ENST00000455183 2001 ntBASIC16.71■□□□□ 0.27
P04436 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.71■□□□□ 0.27
P04436 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.71■□□□□ 0.27
P04436 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.71■□□□□ 0.27
P04436 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.71■□□□□ 0.27
P04436 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
P04436 IGHV3-41-201ENST00000613121 348 ntBASIC16.71■□□□□ 0.27
P04436 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.71■□□□□ 0.27
P04436 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.71■□□□□ 0.27
P04436 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.71■□□□□ 0.27
P04436 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04436 AL031598.1-201ENST00000561511 1773 ntBASIC16.71■□□□□ 0.27
P04436 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.71■□□□□ 0.27
P04436 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04436 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.7■□□□□ 0.26
P04436 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
P04436 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.7■□□□□ 0.26
P04436 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
P04436 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04436 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.7■□□□□ 0.26
P04436 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.7■□□□□ 0.26
P04436 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.7■□□□□ 0.26
P04436 GUSBP12-201ENST00000513727 720 ntBASIC16.7■□□□□ 0.26
P04436 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.7■□□□□ 0.26
P04436 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.7■□□□□ 0.26
P04436 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.7■□□□□ 0.26
P04436 NPAP1P7-201ENST00000613027 823 ntBASIC16.7■□□□□ 0.26
P04436 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
P04436 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04436 AP000974.1-201ENST00000623909 2387 ntBASIC16.7■□□□□ 0.26
P04436 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04436 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
P04436 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.69■□□□□ 0.26
P04436 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
P04436 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04436 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04436 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04436 AL353692.3-201ENST00000407031 1396 ntBASIC16.69■□□□□ 0.26
P04436 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.69■□□□□ 0.26
P04436 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04436 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.69■□□□□ 0.26
P04436 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
P04436 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.69■□□□□ 0.26
P04436 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.69■□□□□ 0.26
P04436 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.69■□□□□ 0.26
P04436 AP002414.4-201ENST00000589764 1148 ntBASIC16.69■□□□□ 0.26
P04436 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.69■□□□□ 0.26
P04436 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04436 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04436 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms