Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CSPG5O95196 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 RN7SL606P-201ENST00000472779 293 ntBASIC19.64■□□□□ 0.73
CSPG5O95196 AC073648.2-201ENST00000510116 352 ntBASIC19.64■□□□□ 0.73
CSPG5O95196 RNA5SP419-201ENST00000515908 135 ntBASIC19.64■□□□□ 0.73
CSPG5O95196 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.64■□□□□ 0.73
CSPG5O95196 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.64■□□□□ 0.73
CSPG5O95196 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.64■□□□□ 0.73
CSPG5O95196 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CSPG5O95196 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.64■□□□□ 0.73
CSPG5O95196 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.64■□□□□ 0.73
CSPG5O95196 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.64■□□□□ 0.73
CSPG5O95196 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CSPG5O95196 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CSPG5O95196 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSPG5O95196 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CSPG5O95196 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 AC243591.1-201ENST00000452967 1364 ntBASIC19.63■□□□□ 0.73
CSPG5O95196 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.63■□□□□ 0.73
CSPG5O95196 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.63■□□□□ 0.73
CSPG5O95196 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.63■□□□□ 0.73
CSPG5O95196 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.63■□□□□ 0.73
CSPG5O95196 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.63■□□□□ 0.73
CSPG5O95196 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.63■□□□□ 0.73
CSPG5O95196 AL591684.3-201ENST00000605187 298 ntBASIC19.63■□□□□ 0.73
CSPG5O95196 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CSPG5O95196 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CSPG5O95196 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.63■□□□□ 0.73
CSPG5O95196 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSPG5O95196 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CSPG5O95196 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.62■□□□□ 0.73
CSPG5O95196 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 KRT8P32-201ENST00000512863 1461 ntBASIC19.62■□□□□ 0.73
CSPG5O95196 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.62■□□□□ 0.73
CSPG5O95196 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.62■□□□□ 0.73
CSPG5O95196 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.62■□□□□ 0.73
CSPG5O95196 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.62■□□□□ 0.73
CSPG5O95196 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.62■□□□□ 0.73
CSPG5O95196 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.62■□□□□ 0.73
CSPG5O95196 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CSPG5O95196 AC064862.7-201ENST00000604520 867 ntBASIC19.62■□□□□ 0.73
CSPG5O95196 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.62■□□□□ 0.73
CSPG5O95196 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.62■□□□□ 0.73
CSPG5O95196 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSPG5O95196 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 AC125437.2-201ENST00000625180 2167 ntBASIC19.61■□□□□ 0.73
CSPG5O95196 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CSPG5O95196 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.61■□□□□ 0.73
CSPG5O95196 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.61■□□□□ 0.73
CSPG5O95196 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
CSPG5O95196 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.61■□□□□ 0.73
CSPG5O95196 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSPG5O95196 AF186996.4-201ENST00000467186 377 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms