Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Matn4O89029 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Matn4O89029 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.57□□□□□ -0.08
Matn4O89029 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Matn4O89029 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.57□□□□□ -0.08
Matn4O89029 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Matn4O89029 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.56□□□□□ -0.08
Matn4O89029 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.56□□□□□ -0.08
Matn4O89029 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Matn4O89029 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.56□□□□□ -0.08
Matn4O89029 Gm19164-201ENSMUST00000210667 640 ntBASIC14.56□□□□□ -0.08
Matn4O89029 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.56□□□□□ -0.08
Matn4O89029 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.56□□□□□ -0.08
Matn4O89029 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Matn4O89029 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Matn4O89029 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Matn4O89029 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.56□□□□□ -0.08
Matn4O89029 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Matn4O89029 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Matn4O89029 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Matn4O89029 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Matn4O89029 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Matn4O89029 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Matn4O89029 Gm17808-201ENSMUST00000200859 894 ntBASIC14.55□□□□□ -0.08
Matn4O89029 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Matn4O89029 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Matn4O89029 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Matn4O89029 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Matn4O89029 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Matn4O89029 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Matn4O89029 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Matn4O89029 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Matn4O89029 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Matn4O89029 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Matn4O89029 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.54□□□□□ -0.08
Matn4O89029 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Matn4O89029 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.54□□□□□ -0.08
Matn4O89029 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Matn4O89029 Gm12134-201ENSMUST00000122109 520 ntBASIC14.54□□□□□ -0.08
Matn4O89029 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms