Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMAD9O15198 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 AP000523.1-201ENST00000398242 1049 ntBASIC16.64■□□□□ 0.25
SMAD9O15198 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.64■□□□□ 0.25
SMAD9O15198 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.64■□□□□ 0.25
SMAD9O15198 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.64■□□□□ 0.25
SMAD9O15198 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 AC139887.4-201ENST00000607877 719 ntBASIC16.64■□□□□ 0.25
SMAD9O15198 AL023973.1-201ENST00000624619 620 ntBASIC16.64■□□□□ 0.25
SMAD9O15198 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SMAD9O15198 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SMAD9O15198 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMAD9O15198 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.63■□□□□ 0.25
SMAD9O15198 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.63■□□□□ 0.25
SMAD9O15198 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 ANO7L1-203ENST00000602586 1720 ntBASIC16.63■□□□□ 0.25
SMAD9O15198 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.63■□□□□ 0.25
SMAD9O15198 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 MIR1224-201ENST00000408193 85 ntBASIC16.63■□□□□ 0.25
SMAD9O15198 AC117947.1-201ENST00000427448 529 ntBASIC16.63■□□□□ 0.25
SMAD9O15198 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SMAD9O15198 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.63■□□□□ 0.25
SMAD9O15198 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.63■□□□□ 0.25
SMAD9O15198 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 AC112497.1-201ENST00000624824 639 ntBASIC16.63■□□□□ 0.25
SMAD9O15198 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMAD9O15198 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMAD9O15198 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 HOXB1-202ENST00000577092 1414 ntBASIC16.62■□□□□ 0.25
SMAD9O15198 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SMAD9O15198 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.62■□□□□ 0.25
SMAD9O15198 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.62■□□□□ 0.25
SMAD9O15198 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SMAD9O15198 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SMAD9O15198 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 KRT18P23-201ENST00000435622 1283 ntBASIC16.62■□□□□ 0.25
SMAD9O15198 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 AC104076.2-201ENST00000448912 469 ntBASIC16.62■□□□□ 0.25
SMAD9O15198 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.62■□□□□ 0.25
SMAD9O15198 YBX1P2-201ENST00000489612 999 ntBASIC16.62■□□□□ 0.25
SMAD9O15198 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.62■□□□□ 0.25
SMAD9O15198 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SMAD9O15198 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.62■□□□□ 0.25
SMAD9O15198 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.62■□□□□ 0.25
SMAD9O15198 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMAD9O15198 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
SMAD9O15198 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.62■□□□□ 0.25
SMAD9O15198 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMAD9O15198 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SMAD9O15198 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms