Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A1O14983 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A1O14983 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A1O14983 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A1O14983 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A1O14983 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATP2A1O14983 SLC25A6P4-201ENST00000586535 553 ntBASIC20.94■□□□□ 0.94
ATP2A1O14983 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP2A1O14983 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP2A1O14983 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A1O14983 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A1O14983 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A1O14983 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A1O14983 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A1O14983 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2A1O14983 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2A1O14983 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2A1O14983 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2A1O14983 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2A1O14983 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2A1O14983 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2A1O14983 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2A1O14983 SAPCD2P3-201ENST00000455031 850 ntBASIC20.93■□□□□ 0.94
ATP2A1O14983 MINOS1P3-201ENST00000457048 203 ntBASIC20.93■□□□□ 0.94
ATP2A1O14983 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2A1O14983 AC068472.1-201ENST00000474589 881 ntBASIC20.93■□□□□ 0.94
ATP2A1O14983 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2A1O14983 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2A1O14983 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2A1O14983 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
ATP2A1O14983 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.92■□□□□ 0.94
ATP2A1O14983 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP2A1O14983 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2A1O14983 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2A1O14983 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2A1O14983 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP2A1O14983 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ATP2A1O14983 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2A1O14983 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATP2A1O14983 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2A1O14983 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2A1O14983 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2A1O14983 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A1O14983 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2A1O14983 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A1O14983 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2A1O14983 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A1O14983 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A1O14983 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A1O14983 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
ATP2A1O14983 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ATP2A1O14983 NUS1P2-201ENST00000417358 873 ntBASIC20.91■□□□□ 0.94
ATP2A1O14983 TSPY12P-201ENST00000421279 868 ntBASIC20.91■□□□□ 0.94
ATP2A1O14983 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2A1O14983 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ATP2A1O14983 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2A1O14983 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ATP2A1O14983 AL662844.1-201ENST00000546340 181 ntBASIC20.91■□□□□ 0.94
ATP2A1O14983 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2A1O14983 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ATP2A1O14983 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2A1O14983 AC116562.4-201ENST00000641316 2276 ntBASIC20.9■□□□□ 0.94
ATP2A1O14983 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2A1O14983 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 AF238378.1-201ENST00000526806 358 ntBASIC20.9■□□□□ 0.94
ATP2A1O14983 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP2A1O14983 AC114341.1-201ENST00000618070 349 ntBASIC20.9■□□□□ 0.94
ATP2A1O14983 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP2A1O14983 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2A1O14983 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms