Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL158047.1-201ENST00000445918 881 ntBASIC15.62■□□□□ 0.09
SDCBPO00560 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.62■□□□□ 0.09
SDCBPO00560 AC026271.3-201ENST00000571884 352 ntBASIC15.62■□□□□ 0.09
SDCBPO00560 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.62■□□□□ 0.09
SDCBPO00560 MYC-208ENST00000641036 567 ntBASIC15.62■□□□□ 0.09
SDCBPO00560 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
SDCBPO00560 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.62■□□□□ 0.09
SDCBPO00560 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SDCBPO00560 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SDCBPO00560 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SDCBPO00560 AC138028.4-201ENST00000564984 1845 ntBASIC15.61■□□□□ 0.09
SDCBPO00560 AL357033.4-201ENST00000617703 1807 ntBASIC15.61■□□□□ 0.09
SDCBPO00560 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.61■□□□□ 0.09
SDCBPO00560 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SDCBPO00560 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SDCBPO00560 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.61■□□□□ 0.09
SDCBPO00560 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.61■□□□□ 0.09
SDCBPO00560 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 AC091390.4-202ENST00000476426 537 ntBASIC15.61■□□□□ 0.09
SDCBPO00560 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SDCBPO00560 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 AC011298.2-201ENST00000617989 482 ntBASIC15.61■□□□□ 0.09
SDCBPO00560 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.61■□□□□ 0.09
SDCBPO00560 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.61■□□□□ 0.09
SDCBPO00560 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
SDCBPO00560 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SDCBPO00560 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
SDCBPO00560 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SDCBPO00560 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SDCBPO00560 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 KRT8P32-201ENST00000512863 1461 ntBASIC15.6■□□□□ 0.09
SDCBPO00560 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.6■□□□□ 0.09
SDCBPO00560 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.6■□□□□ 0.09
SDCBPO00560 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.6■□□□□ 0.09
SDCBPO00560 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.6■□□□□ 0.09
SDCBPO00560 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.6■□□□□ 0.09
SDCBPO00560 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.6■□□□□ 0.09
SDCBPO00560 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.6■□□□□ 0.09
SDCBPO00560 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SDCBPO00560 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SDCBPO00560 AC112777.1-201ENST00000540175 1423 ntBASIC15.6■□□□□ 0.09
SDCBPO00560 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SDCBPO00560 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.59■□□□□ 0.09
SDCBPO00560 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.59■□□□□ 0.09
SDCBPO00560 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SDCBPO00560 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms