Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 AC004835.2-201ENST00000603762 682 ntBASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 AC073314.1-201ENST00000568729 2216 ntBASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
TMEM88BA6NKF7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
TMEM88BA6NKF7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM88BA6NKF7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 MRPL20P1-201ENST00000400819 433 ntBASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 PRYP5-201ENST00000451909 266 ntBASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM88BA6NKF7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 MIR149-201ENST00000384879 89 ntBASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 PMS2P4-201ENST00000412466 1052 ntBASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 HLA-V-201ENST00000429037 534 ntBASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 DUX4L17-201ENST00000557360 1267 ntBASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TMEM88BA6NKF7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 AC108073.2-201ENST00000464002 357 ntBASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 PDPK2P-202ENST00000562415 1191 ntBASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 AC073592.4-201ENST00000623827 446 ntBASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM88BA6NKF7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 AC087641.1-201ENST00000557561 1021 ntBASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms