Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT11Q9UKZ1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CNOT11Q9UKZ1 AC135776.1-201ENST00000319817 2481 ntBASIC17.64■□□□□ 0.42
CNOT11Q9UKZ1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 KRT8P41-201ENST00000533985 1514 ntBASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 AC084018.2-201ENST00000613093 2607 ntBASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 KRT8P9-201ENST00000558927 1449 ntBASIC17.64■□□□□ 0.41
CNOT11Q9UKZ1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 AL390955.1-201ENST00000428694 934 ntBASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 FAM207BP-201ENST00000447172 505 ntBASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 AC090340.1-201ENST00000620778 4980 ntBASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT11Q9UKZ1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 AC211429.1-201ENST00000415277 523 ntBASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 AC097488.1-201ENST00000507834 756 ntBASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 AP005242.2-201ENST00000580065 1175 ntBASIC17.62■□□□□ 0.41
CNOT11Q9UKZ1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms