Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AL645939.2-201ENST00000427340 991 ntBASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.38■□□□□ 0.69
CHD7Q9P2D1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AC112777.1-201ENST00000540175 1423 ntBASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 MTDHP4-201ENST00000600287 670 ntBASIC19.38■□□□□ 0.69
CHD7Q9P2D1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 MCCD1P2-201ENST00000423228 335 ntBASIC19.38■□□□□ 0.69
CHD7Q9P2D1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD7Q9P2D1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 HLA-J-203ENST00000494367 1087 ntBASIC19.37■□□□□ 0.69
CHD7Q9P2D1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 HLA-J-202ENST00000469281 1241 ntBASIC19.37■□□□□ 0.69
CHD7Q9P2D1 AC027612.4-201ENST00000605371 583 ntBASIC19.37■□□□□ 0.69
CHD7Q9P2D1 AC106028.4-201ENST00000614509 607 ntBASIC19.37■□□□□ 0.69
CHD7Q9P2D1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD7Q9P2D1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.36■□□□□ 0.69
CHD7Q9P2D1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 AC002310.6-201ENST00000624451 1377 ntBASIC19.36■□□□□ 0.69
CHD7Q9P2D1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 AL499627.1-201ENST00000569373 2188 ntBASIC19.36■□□□□ 0.69
CHD7Q9P2D1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD7Q9P2D1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 KRT18P2-201ENST00000447938 1258 ntBASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AC068472.1-201ENST00000474589 881 ntBASIC19.35■□□□□ 0.69
CHD7Q9P2D1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AL049812.1-201ENST00000432563 2267 ntBASIC19.35■□□□□ 0.69
CHD7Q9P2D1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms