Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL163051.1-201ENST00000569214 1512 ntBASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 AC009065.1-201ENST00000564055 1225 ntBASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 TERC-201ENST00000602385 541 ntBASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 AC112777.1-201ENST00000540175 1423 ntBASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 AC018445.3-201ENST00000624177 1945 ntBASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM7Q9NR12 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 ANO7L1-203ENST00000602586 1720 ntBASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 MINOS1P3-201ENST00000457048 203 ntBASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 AC093909.1-201ENST00000504731 1122 ntBASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 MIR7706-201ENST00000613747 67 ntBASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDLIM7Q9NR12 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 AC098818.2-201ENST00000564925 2320 ntBASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 MYLKP1-201ENST00000509077 1580 ntBASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM7Q9NR12 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
PDLIM7Q9NR12 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.45■□□□□ 0.87
PDLIM7Q9NR12 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 MIR940-201ENST00000401276 94 ntBASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 POM121L3P-201ENST00000419331 1163 ntBASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 AC018712.1-201ENST00000455767 687 ntBASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 AL049840.3-201ENST00000602669 611 ntBASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms