Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 AC010653.2-201ENST00000623505 997 ntBASIC18.96■□□□□ 0.63
PCDH9Q9HC56 AC133561.5-201ENST00000635547 218 ntBASIC18.96■□□□□ 0.63
PCDH9Q9HC56 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 AP000997.3-201ENST00000623333 2250 ntBASIC18.95■□□□□ 0.62
PCDH9Q9HC56 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 ECEL1P2-202ENST00000465689 757 ntBASIC18.95■□□□□ 0.62
PCDH9Q9HC56 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 MIR4674-201ENST00000582457 87 ntBASIC18.95■□□□□ 0.62
PCDH9Q9HC56 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 AC145285.6-201ENST00000604632 637 ntBASIC18.95■□□□□ 0.62
PCDH9Q9HC56 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 KRT18P22-201ENST00000402024 1347 ntBASIC18.95■□□□□ 0.62
PCDH9Q9HC56 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH9Q9HC56 FLJ13224-201ENST00000313737 1514 ntBASIC18.95■□□□□ 0.62
PCDH9Q9HC56 GNAS-203ENST00000306120 1878 ntBASIC18.94■□□□□ 0.62
PCDH9Q9HC56 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH9Q9HC56 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 GMCL1P1-201ENST00000463439 1581 ntBASIC18.93■□□□□ 0.62
PCDH9Q9HC56 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH9Q9HC56 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms