Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL163051.1-201ENST00000569214 1512 ntBASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 AC128676.1-201ENST00000454392 318 ntBASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 PRORSD1P-202ENST00000563365 2154 ntBASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC44A1Q8WWI5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SLC44A1Q8WWI5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.54
SLC44A1Q8WWI5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 AC009102.3-201ENST00000623118 1491 ntBASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC44A1Q8WWI5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 AC093010.1-201ENST00000473625 1624 ntBASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 MIR149-201ENST00000384879 89 ntBASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 RPPH1-201ENST00000516869 333 ntBASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 MIR3180-5-201ENST00000583743 153 ntBASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 TMEM191A-211ENST00000637163 1067 ntBASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 AC036111.1-201ENST00000533973 1582 ntBASIC18.38■□□□□ 0.53
SLC44A1Q8WWI5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 MFAP1P1-201ENST00000442257 1255 ntBASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.37■□□□□ 0.53
SLC44A1Q8WWI5 KRT18P55-202ENST00000578578 1546 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms