Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 AC136632.2-201ENST00000512891 861 ntBASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 VN2R19P-201ENST00000442399 1052 ntBASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AL024508.2-201ENST00000607749 1894 ntBASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AP002472.1-201ENST00000577490 586 ntBASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AC005498.2-205ENST00000593218 784 ntBASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 AP000867.4-201ENST00000641616 219 ntBASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 HEIH-201ENST00000623091 1652 ntBASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.29□□□□□ -0.44
ALMS1Q8TCU4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC112698.1-201ENST00000510299 916 ntBASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC005829.1-201ENST00000570002 483 ntBASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AL390955.2-201ENST00000603032 514 ntBASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms