Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp1r3eQ8BRJ4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Sybu-209ENSMUST00000228639 4113 ntBASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Mir770-201ENSMUST00000103252 94 ntBASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.48□□□□□ -0.09
Ppp1r3eQ8BRJ4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm17971-201ENSMUST00000190239 806 ntBASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp1r3eQ8BRJ4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ppp1r3eQ8BRJ4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms