Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AC130371.2-201ENST00000619443 611 ntBASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AL357033.4-201ENST00000617703 1807 ntBASIC11.83□□□□□ -0.51
MRPL55Q7Z7F7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 AL354751.1-201ENST00000412768 1863 ntBASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 B3GAT3P1-201ENST00000471720 806 ntBASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ITM2C-210ENST00000620962 501 ntBASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 AL359736.2-201ENST00000621992 437 ntBASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 LTB4R2-202ENST00000528054 3092 ntBASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ABALON-201ENST00000629058 1903 ntBASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
MRPL55Q7Z7F7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AL499627.1-201ENST00000569373 2188 ntBASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AC126755.1-201ENST00000525846 6405 ntBASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms