Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 IGHV3-22-201ENST00000520721 359 ntBASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 SART3-203ENST00000546611 1184 ntBASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD4Q5XG99 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 ABCD1P5-201ENST00000445663 754 ntBASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 PGAM5P1-201ENST00000518923 814 ntBASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 AC140113.2-201ENST00000604370 208 ntBASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 FAM197Y3-203ENST00000618346 717 ntBASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD4Q5XG99 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 AL591424.1-201ENST00000442569 1213 ntBASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 AC092910.1-201ENST00000482027 1129 ntBASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 OR7E14P-202ENST00000530490 1290 ntBASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 AL356488.2-201ENST00000602755 427 ntBASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD4Q5XG99 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms