Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AC117947.1-201ENST00000427448 529 ntBASIC20.87■□□□□ 0.93
LONRF3Q496Y0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AL023803.3-201ENST00000615559 522 ntBASIC20.87■□□□□ 0.93
LONRF3Q496Y0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AC138932.1-201ENST00000534164 6830 ntBASIC20.87■□□□□ 0.93
LONRF3Q496Y0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 MCCD1P1-208ENST00000445732 328 ntBASIC20.86■□□□□ 0.93
LONRF3Q496Y0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.86■□□□□ 0.93
LONRF3Q496Y0 AC008764.6-201ENST00000595909 2069 ntBASIC20.85■□□□□ 0.93
LONRF3Q496Y0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 BX664615.1-201ENST00000443558 458 ntBASIC20.85■□□□□ 0.93
LONRF3Q496Y0 MIR4674-201ENST00000582457 87 ntBASIC20.85■□□□□ 0.93
LONRF3Q496Y0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 AL138966.2-201ENST00000621997 464 ntBASIC20.85■□□□□ 0.93
LONRF3Q496Y0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.85■□□□□ 0.93
LONRF3Q496Y0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.84■□□□□ 0.93
LONRF3Q496Y0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 KRT8P50-201ENST00000562022 1438 ntBASIC20.84■□□□□ 0.93
LONRF3Q496Y0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LONRF3Q496Y0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LONRF3Q496Y0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms