Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDH13P55290 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH13P55290 AP000593.1-201ENST00000393668 712 ntBASIC17.97■□□□□ 0.47
CDH13P55290 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 AC012618.2-201ENST00000428058 849 ntBASIC17.97■□□□□ 0.47
CDH13P55290 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 AL355355.2-201ENST00000442321 338 ntBASIC17.97■□□□□ 0.47
CDH13P55290 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH13P55290 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH13P55290 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH13P55290 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CDH13P55290 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH13P55290 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH13P55290 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH13P55290 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 CA15P1-201ENST00000481698 905 ntBASIC17.96■□□□□ 0.47
CDH13P55290 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH13P55290 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH13P55290 Z99916.2-201ENST00000604037 246 ntBASIC17.96■□□□□ 0.47
CDH13P55290 AP001412.1-201ENST00000608405 714 ntBASIC17.96■□□□□ 0.47
CDH13P55290 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH13P55290 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH13P55290 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH13P55290 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH13P55290 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH13P55290 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDH13P55290 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH13P55290 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 AL096828.2-201ENST00000567259 1965 ntBASIC17.95■□□□□ 0.46
CDH13P55290 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH13P55290 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH13P55290 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH13P55290 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH13P55290 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH13P55290 MIR3180-5-201ENST00000583743 153 ntBASIC17.95■□□□□ 0.46
CDH13P55290 AC026471.5-201ENST00000615068 467 ntBASIC17.95■□□□□ 0.46
CDH13P55290 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH13P55290 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH13P55290 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 GMCL1P1-201ENST00000463439 1581 ntBASIC17.95■□□□□ 0.46
CDH13P55290 AC036111.1-201ENST00000533973 1582 ntBASIC17.95■□□□□ 0.46
CDH13P55290 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH13P55290 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH13P55290 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH13P55290 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH13P55290 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH13P55290 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDH13P55290 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH13P55290 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH13P55290 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH13P55290 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH13P55290 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
CDH13P55290 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH13P55290 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH13P55290 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH13P55290 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH13P55290 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CDH13P55290 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CDH13P55290 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH13P55290 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH13P55290 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH13P55290 PHGDH-209ENST00000641074 1780 ntBASIC17.94■□□□□ 0.46
CDH13P55290 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms