Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 MTCYBP31-201ENST00000438855 1122 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 OR52U1P-201ENST00000439752 923 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 NPM1P49-201ENST00000448027 714 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXD11P31277 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HOXD11P31277 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXD11P31277 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXD11P31277 AC087894.1-201ENST00000538359 518 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HOXD11P31277 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXD11P31277 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXD11P31277 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXD11P31277 AL353719.1-201ENST00000566847 864 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXD11P31277 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXD11P31277 AC092364.2-202ENST00000597012 1073 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 AC010776.3-201ENST00000617349 424 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HOXD11P31277 AC116631.1-202ENST00000640984 683 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXD11P31277 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HOXD11P31277 AC024341.1-201ENST00000526444 1552 ntBASIC19.56■□□□□ 0.72
HOXD11P31277 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXD11P31277 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXD11P31277 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXD11P31277 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXD11P31277 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXD11P31277 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXD11P31277 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXD11P31277 AC098831.1-202ENST00000438821 336 ntBASIC19.55■□□□□ 0.72
HOXD11P31277 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXD11P31277 HGF-207ENST00000453018 721 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXD11P31277 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXD11P31277 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXD11P31277 AP001462.1-201ENST00000594089 452 ntBASIC19.55■□□□□ 0.72
HOXD11P31277 BNIP3P30-201ENST00000601184 574 ntBASIC19.55■□□□□ 0.72
HOXD11P31277 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXD11P31277 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
HOXD11P31277 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXD11P31277 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXD11P31277 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HOXD11P31277 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXD11P31277 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
HOXD11P31277 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.54■□□□□ 0.72
HOXD11P31277 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 SART3-203ENST00000546611 1184 ntBASIC19.54■□□□□ 0.72
HOXD11P31277 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 AC009075.2-201ENST00000568483 301 ntBASIC19.54■□□□□ 0.72
HOXD11P31277 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.54■□□□□ 0.72
HOXD11P31277 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
HOXD11P31277 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HOXD11P31277 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXD11P31277 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXD11P31277 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXD11P31277 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HOXD11P31277 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 HNRNPH3P1-201ENST00000431935 583 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 AP002383.4-201ENST00000442518 975 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 ELOCP13-201ENST00000443934 329 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HOXD11P31277 HNRNPDLP2-201ENST00000455248 751 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 BTF3L4-204ENST00000484036 941 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
HOXD11P31277 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms