Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.02■■□□□ 1.12
COL1A1P02452 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.02■■□□□ 1.12
COL1A1P02452 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
COL1A1P02452 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL1A1P02452 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
COL1A1P02452 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
COL1A1P02452 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.01■■□□□ 1.11
COL1A1P02452 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.01■■□□□ 1.11
COL1A1P02452 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.01■■□□□ 1.11
COL1A1P02452 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 AC096582.2-201ENST00000510860 516 ntBASIC22.01■■□□□ 1.11
COL1A1P02452 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.01■■□□□ 1.11
COL1A1P02452 AP001005.1-201ENST00000571755 1248 ntBASIC22.01■■□□□ 1.11
COL1A1P02452 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
COL1A1P02452 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL1A1P02452 AL773604.1-201ENST00000617417 272 ntBASIC22.01■■□□□ 1.11
COL1A1P02452 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.01■■□□□ 1.11
COL1A1P02452 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.01■■□□□ 1.11
COL1A1P02452 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.01■■□□□ 1.11
COL1A1P02452 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22■■□□□ 1.11
COL1A1P02452 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 LINC00602-201ENST00000629776 2065 ntBASIC22■■□□□ 1.11
COL1A1P02452 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
COL1A1P02452 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
COL1A1P02452 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22■■□□□ 1.11
COL1A1P02452 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22■■□□□ 1.11
COL1A1P02452 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL1A1P02452 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22■■□□□ 1.11
COL1A1P02452 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 AC132938.6-201ENST00000623828 1655 ntBASIC22■■□□□ 1.11
COL1A1P02452 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COL1A1P02452 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL1A1P02452 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.99■■□□□ 1.11
COL1A1P02452 AL590627.1-203ENST00000421194 1026 ntBASIC21.99■■□□□ 1.11
COL1A1P02452 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.99■■□□□ 1.11
COL1A1P02452 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.99■■□□□ 1.11
COL1A1P02452 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.99■■□□□ 1.11
COL1A1P02452 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
COL1A1P02452 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.99■■□□□ 1.11
COL1A1P02452 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
COL1A1P02452 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
COL1A1P02452 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL1A1P02452 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.98■■□□□ 1.11
COL1A1P02452 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 AF238378.1-201ENST00000526806 358 ntBASIC21.98■■□□□ 1.11
COL1A1P02452 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.98■■□□□ 1.11
COL1A1P02452 AC011840.4-201ENST00000578471 627 ntBASIC21.98■■□□□ 1.11
COL1A1P02452 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.98■■□□□ 1.11
COL1A1P02452 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL1A1P02452 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.97■■□□□ 1.11
COL1A1P02452 AC068472.1-201ENST00000474589 881 ntBASIC21.97■■□□□ 1.11
COL1A1P02452 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A1P02452 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.97■■□□□ 1.11
COL1A1P02452 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
COL1A1P02452 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.97■■□□□ 1.11
COL1A1P02452 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL1A1P02452 AC114341.1-201ENST00000618070 349 ntBASIC21.97■■□□□ 1.11
COL1A1P02452 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.97■■□□□ 1.11
COL1A1P02452 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
COL1A1P02452 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms