Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLIC4Q9Y696 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIC4Q9Y696 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC4Q9Y696 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIC4Q9Y696 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 TSPY14P-201ENST00000303979 915 ntBASIC20.98■□□□□ 0.95
CLIC4Q9Y696 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLIC4Q9Y696 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 AC010947.1-201ENST00000623454 693 ntBASIC20.97■□□□□ 0.95
CLIC4Q9Y696 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC4Q9Y696 LINC01126-201ENST00000623515 1646 ntBASIC20.96■□□□□ 0.95
CLIC4Q9Y696 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 AP000997.3-201ENST00000623333 2250 ntBASIC20.96■□□□□ 0.95
CLIC4Q9Y696 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 C2orf69P3-201ENST00000565542 1120 ntBASIC20.96■□□□□ 0.95
CLIC4Q9Y696 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 AC134043.2-201ENST00000624206 2238 ntBASIC20.96■□□□□ 0.95
CLIC4Q9Y696 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLIC4Q9Y696 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLIC4Q9Y696 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 EGLN1P1-201ENST00000531623 762 ntBASIC20.95■□□□□ 0.94
CLIC4Q9Y696 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms