Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 RASA4DP-201ENST00000460726 1199 ntBASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 HYMAI.1-201ENST00000620949 238 ntBASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF3C4Q9UKN8 AL162741.1-201ENST00000565563 1558 ntBASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 AL358472.4-201ENST00000633140 710 ntBASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GTF3C4Q9UKN8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 AC034236.2-201ENST00000606662 1610 ntBASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 AC034232.1-201ENST00000506026 1064 ntBASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 FAM86EP-206ENST00000510506 987 ntBASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.77■□□□□ 0.76
GTF3C4Q9UKN8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
GTF3C4Q9UKN8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GTF3C4Q9UKN8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 HOXB1-202ENST00000577092 1414 ntBASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 AC092597.1-201ENST00000487352 616 ntBASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 AL121956.5-201ENST00000625261 221 ntBASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms