Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 RNF126P1-202ENST00000569893 925 ntBASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 TSPY22P-201ENST00000427496 604 ntBASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CHCHD2P8-201ENST00000429873 447 ntBASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 AC104390.1-201ENST00000555663 520 ntBASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 RN7SL510P-201ENST00000581311 263 ntBASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 AC018470.1-201ENST00000624790 3129 ntBASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.74■□□□□ 0.91
HDAC6Q9UBN7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 AC010240.3-201ENST00000607688 395 ntBASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDAC6Q9UBN7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 KRT8P7-201ENST00000533003 1432 ntBASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 UNC93B7-201ENST00000509439 705 ntBASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms