Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 TPSP2-201ENST00000561760 610 ntBASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 AC090616.6-201ENST00000582640 721 ntBASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CLCF1Q9UBD9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 SDHAP2-201ENST00000455183 2001 ntBASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 ANO7L1-203ENST00000602586 1720 ntBASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 AC012313.10-201ENST00000623509 926 ntBASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCF1Q9UBD9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 AL353692.3-201ENST00000407031 1396 ntBASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 MIR3652-201ENST00000579335 131 ntBASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 AC008687.5-201ENST00000593746 558 ntBASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCF1Q9UBD9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms