Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 KRT8P45-201ENST00000414328 1447 ntBASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN7CQ9NUP9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 Z85996.1-201ENST00000494644 937 ntBASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 AC116562.2-201ENST00000507042 360 ntBASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 KRT8P3-201ENST00000519669 1449 ntBASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN7CQ9NUP9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AC008764.6-201ENST00000595909 2069 ntBASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AC020916.1-201ENST00000587762 1774 ntBASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AC004951.3-201ENST00000418645 1148 ntBASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AP003071.4-201ENST00000562276 1284 ntBASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 DGCR10-201ENST00000609839 495 ntBASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 MIR6786-201ENST00000616843 113 ntBASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIN7CQ9NUP9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms