Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LIMD2Q9BT23 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 USP39-202ENST00000409025 1946 ntTSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 KATNBL1P6-202ENST00000562413 1466 ntBASIC10.96□□□□□ -0.65
LIMD2Q9BT23 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 DERL1-203ENST00000419562 918 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 AC073195.1-201ENST00000607241 877 ntBASIC10.96□□□□□ -0.65
LIMD2Q9BT23 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 MMD2-204ENST00000612910 778 ntTSL 5 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC10.96□□□□□ -0.65
LIMD2Q9BT23 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC10.96□□□□□ -0.66
LIMD2Q9BT23 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 GAS2L1P1-201ENST00000420145 1480 ntBASIC10.95□□□□□ -0.66
LIMD2Q9BT23 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 AC004951.3-201ENST00000418645 1148 ntBASIC10.95□□□□□ -0.66
LIMD2Q9BT23 TSPY23P-201ENST00000440136 739 ntBASIC10.95□□□□□ -0.66
LIMD2Q9BT23 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 RPPH1-201ENST00000516869 333 ntBASIC10.95□□□□□ -0.66
LIMD2Q9BT23 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 ITM2C-210ENST00000620962 501 ntBASIC10.95□□□□□ -0.66
LIMD2Q9BT23 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC10.95□□□□□ -0.66
LIMD2Q9BT23 MYC-208ENST00000641036 567 ntBASIC10.95□□□□□ -0.66
LIMD2Q9BT23 AC083906.6-201ENST00000641366 219 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms