Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 SDHAP2-201ENST00000455183 2001 ntBASIC13.58□□□□□ -0.24
ODF3Q96PU9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.58□□□□□ -0.24
ODF3Q96PU9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 AC007613.1-201ENST00000572811 2597 ntBASIC13.58□□□□□ -0.24
ODF3Q96PU9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.58□□□□□ -0.24
ODF3Q96PU9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ODF3Q96PU9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 TSPY14P-201ENST00000303979 915 ntBASIC13.57□□□□□ -0.24
ODF3Q96PU9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.57□□□□□ -0.24
ODF3Q96PU9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 AC104390.1-201ENST00000555663 520 ntBASIC13.57□□□□□ -0.24
ODF3Q96PU9 AL512604.3-201ENST00000569583 964 ntBASIC13.57□□□□□ -0.24
ODF3Q96PU9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 AC008687.5-201ENST00000593746 558 ntBASIC13.57□□□□□ -0.24
ODF3Q96PU9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 AC112497.1-201ENST00000624824 639 ntBASIC13.57□□□□□ -0.24
ODF3Q96PU9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ODF3Q96PU9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ODF3Q96PU9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ODF3Q96PU9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 AC007663.1-201ENST00000438948 1240 ntBASIC13.56□□□□□ -0.24
ODF3Q96PU9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.56□□□□□ -0.24
ODF3Q96PU9 AC128688.1-201ENST00000487626 519 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms