Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FAM58DP-201ENST00000428076 619 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 CD63-210ENST00000550776 870 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 NUS1P3-201ENST00000423502 862 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 KRT223P-202ENST00000449164 1292 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC074386.1-202ENST00000463561 864 ntBASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
SYNE2Q8WXH0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 KRT18P32-201ENST00000424695 1287 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AC108725.1-201ENST00000495472 409 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 KRT8P11-201ENST00000409686 1436 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AC098614.1-201ENST00000368528 745 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AC004890.2-204ENST00000481968 304 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AC122714.2-201ENST00000502787 707 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 RPS2P36-201ENST00000456516 831 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 DPP3P2-201ENST00000416030 1696 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 TUBB1P2-201ENST00000422712 1306 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 TUBB1P1-201ENST00000503144 1300 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 IGHV3-65-201ENST00000523210 341 ntBASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SYNE2Q8WXH0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms