Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 AC007613.1-201ENST00000572811 2597 ntBASIC21.96■■□□□ 1.11
RNF20Q5VTR2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 ESPNP-201ENST00000270691 2015 ntBASIC21.96■■□□□ 1.11
RNF20Q5VTR2 SDHAP2-201ENST00000455183 2001 ntBASIC21.96■■□□□ 1.11
RNF20Q5VTR2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF20Q5VTR2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
RNF20Q5VTR2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RNF20Q5VTR2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 AC009947.2-201ENST00000444014 672 ntBASIC21.95■■□□□ 1.1
RNF20Q5VTR2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF20Q5VTR2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 AC087499.1-201ENST00000418141 1075 ntBASIC21.94■■□□□ 1.1
RNF20Q5VTR2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 NEK4P2-201ENST00000580004 1012 ntBASIC21.94■■□□□ 1.1
RNF20Q5VTR2 AC145285.6-201ENST00000604632 637 ntBASIC21.94■■□□□ 1.1
RNF20Q5VTR2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF20Q5VTR2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF20Q5VTR2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms