Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3AQ05086 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 ZNF259P1-201ENST00000407656 1365 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UBE3AQ05086 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
UBE3AQ05086 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UBE3AQ05086 MTMR9LP-203ENST00000426597 1545 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.42■□□□□ 0.7
UBE3AQ05086 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 MIR1233-2-201ENST00000408138 82 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 MIR1233-1-201ENST00000408722 82 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.42■□□□□ 0.7
UBE3AQ05086 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE3AQ05086 RPL13AP23-201ENST00000480739 586 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
UBE3AQ05086 AC092865.5-201ENST00000545435 363 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.42■□□□□ 0.7
UBE3AQ05086 AC005336.2-201ENST00000593183 939 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 MIR7706-201ENST00000613747 67 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
UBE3AQ05086 FAM215A-202ENST00000632077 792 ntBASIC19.42■□□□□ 0.7
UBE3AQ05086 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE3AQ05086 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
UBE3AQ05086 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBE3AQ05086 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3AQ05086 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
UBE3AQ05086 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
UBE3AQ05086 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE3AQ05086 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE3AQ05086 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.41■□□□□ 0.7
UBE3AQ05086 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 TERC-201ENST00000602385 541 ntBASIC19.41■□□□□ 0.7
UBE3AQ05086 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE3AQ05086 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBE3AQ05086 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE3AQ05086 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3AQ05086 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 AC125437.2-201ENST00000625180 2167 ntBASIC19.4■□□□□ 0.7
UBE3AQ05086 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE3AQ05086 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UBE3AQ05086 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.4■□□□□ 0.7
UBE3AQ05086 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.4■□□□□ 0.7
UBE3AQ05086 AC068472.1-201ENST00000474589 881 ntBASIC19.4■□□□□ 0.7
UBE3AQ05086 POLD2P1-201ENST00000511220 997 ntBASIC19.4■□□□□ 0.7
UBE3AQ05086 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.4■□□□□ 0.7
UBE3AQ05086 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 MTDHP3-201ENST00000594186 672 ntBASIC19.4■□□□□ 0.7
UBE3AQ05086 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3AQ05086 AC009102.3-201ENST00000623118 1491 ntBASIC19.4■□□□□ 0.7
UBE3AQ05086 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE3AQ05086 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
UBE3AQ05086 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.39■□□□□ 0.7
UBE3AQ05086 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
UBE3AQ05086 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3AQ05086 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3AQ05086 AL157384.1-201ENST00000445995 2473 ntBASIC19.39■□□□□ 0.69
UBE3AQ05086 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms