Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.45■□□□□ 0.38
GABREP78334 AC114341.1-201ENST00000618070 349 ntBASIC17.45■□□□□ 0.38
GABREP78334 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
GABREP78334 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.45■□□□□ 0.38
GABREP78334 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 PMS2P7-201ENST00000506558 1336 ntBASIC17.45■□□□□ 0.38
GABREP78334 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.44■□□□□ 0.38
GABREP78334 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 TREX1-205ENST00000625293 1783 ntBASIC17.44■□□□□ 0.38
GABREP78334 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GABREP78334 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GABREP78334 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 BX842568.4-201ENST00000421222 227 ntBASIC17.44■□□□□ 0.38
GABREP78334 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.44■□□□□ 0.38
GABREP78334 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
GABREP78334 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.44■□□□□ 0.38
GABREP78334 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.44■□□□□ 0.38
GABREP78334 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABREP78334 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.44■□□□□ 0.38
GABREP78334 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.43■□□□□ 0.38
GABREP78334 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GABREP78334 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GABREP78334 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.43■□□□□ 0.38
GABREP78334 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GABREP78334 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.43■□□□□ 0.38
GABREP78334 AC132008.2-207ENST00000454517 770 ntBASIC17.43■□□□□ 0.38
GABREP78334 AC073648.2-201ENST00000510116 352 ntBASIC17.43■□□□□ 0.38
GABREP78334 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.43■□□□□ 0.38
GABREP78334 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.43■□□□□ 0.38
GABREP78334 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GABREP78334 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GABREP78334 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GABREP78334 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.42■□□□□ 0.38
GABREP78334 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GABREP78334 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GABREP78334 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GABREP78334 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.42■□□□□ 0.38
GABREP78334 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.42■□□□□ 0.38
GABREP78334 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 FAM220CP-201ENST00000395253 831 ntBASIC17.42■□□□□ 0.38
GABREP78334 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.42■□□□□ 0.38
GABREP78334 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
GABREP78334 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.42■□□□□ 0.38
GABREP78334 AC092183.1-201ENST00000469884 875 ntBASIC17.42■□□□□ 0.38
GABREP78334 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.42■□□□□ 0.38
GABREP78334 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.42■□□□□ 0.38
GABREP78334 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GABREP78334 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.42■□□□□ 0.38
GABREP78334 AC139887.3-201ENST00000568585 713 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms