Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC26.23■■□□□ 1.79
CLTCL1P53675 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLTCL1P53675 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
CLTCL1P53675 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26.23■■□□□ 1.79
CLTCL1P53675 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLTCL1P53675 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLTCL1P53675 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLTCL1P53675 RBM17P3-201ENST00000417687 1192 ntBASIC26.22■■□□□ 1.79
CLTCL1P53675 PMS2P1-201ENST00000431037 1228 ntBASIC26.22■■□□□ 1.79
CLTCL1P53675 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC26.22■■□□□ 1.79
CLTCL1P53675 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC26.22■■□□□ 1.79
CLTCL1P53675 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CLTCL1P53675 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC26.22■■□□□ 1.79
CLTCL1P53675 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC26.22■■□□□ 1.79
CLTCL1P53675 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
CLTCL1P53675 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC26.22■■□□□ 1.79
CLTCL1P53675 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLTCL1P53675 MED16-201ENST00000269814 1199 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.21■■□□□ 1.79
CLTCL1P53675 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC26.21■■□□□ 1.79
CLTCL1P53675 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC26.21■■□□□ 1.79
CLTCL1P53675 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLTCL1P53675 HNRNPDP1-201ENST00000439535 754 ntBASIC26.21■■□□□ 1.79
CLTCL1P53675 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC26.21■■□□□ 1.79
CLTCL1P53675 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.21■■□□□ 1.79
CLTCL1P53675 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTCL1P53675 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.79
CLTCL1P53675 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
CLTCL1P53675 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CLTCL1P53675 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.2■■□□□ 1.78
CLTCL1P53675 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 MIR574-201ENST00000385209 96 ntBASIC26.2■■□□□ 1.78
CLTCL1P53675 KRT18P65-201ENST00000439811 1286 ntBASIC26.2■■□□□ 1.78
CLTCL1P53675 AF186996.4-201ENST00000467186 377 ntBASIC26.2■■□□□ 1.78
CLTCL1P53675 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.2■■□□□ 1.78
CLTCL1P53675 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC26.2■■□□□ 1.78
CLTCL1P53675 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC26.2■■□□□ 1.78
CLTCL1P53675 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC26.2■■□□□ 1.78
CLTCL1P53675 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLTCL1P53675 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC26.19■■□□□ 1.78
CLTCL1P53675 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 LINC00602-201ENST00000629776 2065 ntBASIC26.19■■□□□ 1.78
CLTCL1P53675 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC26.19■■□□□ 1.78
CLTCL1P53675 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC26.19■■□□□ 1.78
CLTCL1P53675 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CLTCL1P53675 AF228730.7-201ENST00000641842 219 ntBASIC26.19■■□□□ 1.78
CLTCL1P53675 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC26.19■■□□□ 1.78
CLTCL1P53675 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC26.19■■□□□ 1.78
CLTCL1P53675 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLTCL1P53675 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC26.18■■□□□ 1.78
CLTCL1P53675 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CLTCL1P53675 AC132938.6-201ENST00000623828 1655 ntBASIC26.18■■□□□ 1.78
CLTCL1P53675 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC26.18■■□□□ 1.78
CLTCL1P53675 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
CLTCL1P53675 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 SART3-203ENST00000546611 1184 ntBASIC26.18■■□□□ 1.78
CLTCL1P53675 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC26.18■■□□□ 1.78
CLTCL1P53675 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC26.18■■□□□ 1.78
CLTCL1P53675 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTCL1P53675 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 RBSN-204ENST00000449050 903 ntTSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 RPL18-209ENST00000550645 463 ntTSL 5 BASIC26.17■■□□□ 1.78
CLTCL1P53675 RPL18-214ENST00000552588 559 ntTSL 3 BASIC26.17■■□□□ 1.78
CLTCL1P53675 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms