Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC090616.6-201ENST00000582640 721 ntBASIC15.84■□□□□ 0.13
CD40P25942 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.84■□□□□ 0.13
CD40P25942 AC008687.5-201ENST00000593746 558 ntBASIC15.84■□□□□ 0.13
CD40P25942 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.84■□□□□ 0.13
CD40P25942 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CD40P25942 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CD40P25942 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.84■□□□□ 0.13
CD40P25942 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.84■□□□□ 0.13
CD40P25942 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD40P25942 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD40P25942 ANO7L1-203ENST00000602586 1720 ntBASIC15.83■□□□□ 0.13
CD40P25942 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.83■□□□□ 0.12
CD40P25942 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.83■□□□□ 0.12
CD40P25942 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.83■□□□□ 0.12
CD40P25942 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.83■□□□□ 0.12
CD40P25942 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.83■□□□□ 0.12
CD40P25942 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.83■□□□□ 0.12
CD40P25942 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.83■□□□□ 0.12
CD40P25942 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.83■□□□□ 0.12
CD40P25942 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.83■□□□□ 0.12
CD40P25942 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CD40P25942 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.83■□□□□ 0.12
CD40P25942 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD40P25942 AC099343.3-201ENST00000605834 2503 ntBASIC15.83■□□□□ 0.12
CD40P25942 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40P25942 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 SDHAP2-201ENST00000455183 2001 ntBASIC15.82■□□□□ 0.12
CD40P25942 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40P25942 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
CD40P25942 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.82■□□□□ 0.12
CD40P25942 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40P25942 DUSP5P1-201ENST00000441325 1139 ntBASIC15.82■□□□□ 0.12
CD40P25942 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 KRT126P-201ENST00000549467 1181 ntBASIC15.82■□□□□ 0.12
CD40P25942 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.82■□□□□ 0.12
CD40P25942 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 MIR3652-201ENST00000579335 131 ntBASIC15.82■□□□□ 0.12
CD40P25942 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 IGHV3-41-201ENST00000613121 348 ntBASIC15.82■□□□□ 0.12
CD40P25942 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CD40P25942 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
CD40P25942 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD40P25942 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CD40P25942 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40P25942 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CD40P25942 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40P25942 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40P25942 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CD40P25942 AL353692.3-201ENST00000407031 1396 ntBASIC15.81■□□□□ 0.12
CD40P25942 DRAXINP1-201ENST00000437611 948 ntBASIC15.81■□□□□ 0.12
CD40P25942 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.81■□□□□ 0.12
CD40P25942 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40P25942 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40P25942 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.81■□□□□ 0.12
CD40P25942 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD40P25942 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.81■□□□□ 0.12
CD40P25942 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.81■□□□□ 0.12
CD40P25942 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms