Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FREM3P0C091 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 MIR564-202ENST00000385049 94 ntBASIC16.69■□□□□ 0.26
FREM3P0C091 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.69■□□□□ 0.26
FREM3P0C091 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.69■□□□□ 0.26
FREM3P0C091 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.69■□□□□ 0.26
FREM3P0C091 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.69■□□□□ 0.26
FREM3P0C091 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FREM3P0C091 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.69■□□□□ 0.26
FREM3P0C091 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.68■□□□□ 0.26
FREM3P0C091 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.68■□□□□ 0.26
FREM3P0C091 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 GPR32P1-201ENST00000601788 811 ntBASIC16.68■□□□□ 0.26
FREM3P0C091 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FREM3P0C091 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.68■□□□□ 0.26
FREM3P0C091 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.68■□□□□ 0.26
FREM3P0C091 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
FREM3P0C091 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FREM3P0C091 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.67■□□□□ 0.26
FREM3P0C091 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.67■□□□□ 0.26
FREM3P0C091 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FREM3P0C091 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
FREM3P0C091 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
FREM3P0C091 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.67■□□□□ 0.26
FREM3P0C091 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
FREM3P0C091 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.67■□□□□ 0.26
FREM3P0C091 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.67■□□□□ 0.26
FREM3P0C091 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FREM3P0C091 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
FREM3P0C091 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.67■□□□□ 0.26
FREM3P0C091 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FREM3P0C091 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 AC020763.4-201ENST00000623414 4170 ntBASIC16.67■□□□□ 0.26
FREM3P0C091 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FREM3P0C091 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.66■□□□□ 0.26
FREM3P0C091 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 AC126763.1-201ENST00000552015 2118 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.66■□□□□ 0.26
FREM3P0C091 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.66■□□□□ 0.26
FREM3P0C091 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.66■□□□□ 0.26
FREM3P0C091 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.66■□□□□ 0.26
FREM3P0C091 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 AL121672.3-201ENST00000608644 468 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 NPAP1P7-201ENST00000613027 823 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.66■□□□□ 0.26
FREM3P0C091 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.66■□□□□ 0.26
FREM3P0C091 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 AL162741.1-201ENST00000565563 1558 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 MIR662-201ENST00000384847 95 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms