Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
LTN1O94822 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 AC125634.1-201ENST00000438758 1403 ntBASIC24.29■■□□□ 1.48
LTN1O94822 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
LTN1O94822 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
LTN1O94822 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
LTN1O94822 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 AC005332.7-201ENST00000614046 2005 ntBASIC24.29■■□□□ 1.48
LTN1O94822 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 ABCD1P5-201ENST00000445663 754 ntBASIC24.29■■□□□ 1.48
LTN1O94822 MTCL1P1-201ENST00000446207 792 ntBASIC24.29■■□□□ 1.48
LTN1O94822 AC068472.1-201ENST00000474589 881 ntBASIC24.29■■□□□ 1.48
LTN1O94822 AC009533.2-201ENST00000543664 586 ntBASIC24.29■■□□□ 1.48
LTN1O94822 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.29■■□□□ 1.48
LTN1O94822 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.29■■□□□ 1.48
LTN1O94822 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LTN1O94822 AL139288.1-201ENST00000623748 933 ntBASIC24.29■■□□□ 1.48
LTN1O94822 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC24.29■■□□□ 1.48
LTN1O94822 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC24.28■■□□□ 1.48
LTN1O94822 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.28■■□□□ 1.48
LTN1O94822 AC021087.4-201ENST00000563761 564 ntBASIC24.28■■□□□ 1.48
LTN1O94822 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.28■■□□□ 1.48
LTN1O94822 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC24.28■■□□□ 1.48
LTN1O94822 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LTN1O94822 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.27■■□□□ 1.48
LTN1O94822 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.27■■□□□ 1.48
LTN1O94822 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC24.27■■□□□ 1.48
LTN1O94822 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
LTN1O94822 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.27■■□□□ 1.48
LTN1O94822 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.26■■□□□ 1.47
LTN1O94822 AC092865.5-201ENST00000545435 363 ntBASIC24.26■■□□□ 1.47
LTN1O94822 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC24.26■■□□□ 1.47
LTN1O94822 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
LTN1O94822 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
LTN1O94822 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LTN1O94822 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LTN1O94822 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LTN1O94822 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
LTN1O94822 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC24.26■■□□□ 1.47
LTN1O94822 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC24.26■■□□□ 1.47
LTN1O94822 AC098831.1-202ENST00000438821 336 ntBASIC24.26■■□□□ 1.47
LTN1O94822 KRT18P65-201ENST00000439811 1286 ntBASIC24.26■■□□□ 1.47
LTN1O94822 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
LTN1O94822 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24.26■■□□□ 1.47
LTN1O94822 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC24.26■■□□□ 1.47
LTN1O94822 AC117500.6-201ENST00000624871 588 ntBASIC24.26■■□□□ 1.47
LTN1O94822 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC24.26■■□□□ 1.47
LTN1O94822 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.26■■□□□ 1.47
LTN1O94822 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
LTN1O94822 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.26■■□□□ 1.47
LTN1O94822 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
LTN1O94822 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
LTN1O94822 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC24.25■■□□□ 1.47
LTN1O94822 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
LTN1O94822 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
LTN1O94822 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.25■■□□□ 1.47
LTN1O94822 RPS2P1-201ENST00000434010 821 ntBASIC24.25■■□□□ 1.47
LTN1O94822 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.25■■□□□ 1.47
LTN1O94822 RPL13AP23-201ENST00000480739 586 ntBASIC24.25■■□□□ 1.47
LTN1O94822 AC112698.1-201ENST00000510299 916 ntBASIC24.25■■□□□ 1.47
LTN1O94822 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.25■■□□□ 1.47
LTN1O94822 AC034105.1-201ENST00000563488 319 ntBASIC24.25■■□□□ 1.47
LTN1O94822 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC24.25■■□□□ 1.47
LTN1O94822 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
LTN1O94822 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.25■■□□□ 1.47
LTN1O94822 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LTN1O94822 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.24■■□□□ 1.47
LTN1O94822 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms