Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.45■□□□□ 0.54
Hdac1O09106 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hdac1O09106 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Hdac1O09106 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hdac1O09106 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Sybu-209ENSMUST00000228639 4113 ntBASIC18.44■□□□□ 0.54
Hdac1O09106 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Hdac1O09106 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.44■□□□□ 0.54
Hdac1O09106 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hdac1O09106 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.44■□□□□ 0.54
Hdac1O09106 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hdac1O09106 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hdac1O09106 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.43■□□□□ 0.54
Hdac1O09106 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hdac1O09106 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hdac1O09106 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.43■□□□□ 0.54
Hdac1O09106 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Gm10252-201ENSMUST00000209541 832 ntBASIC18.43■□□□□ 0.54
Hdac1O09106 Gm9172-201ENSMUST00000212092 954 ntBASIC18.43■□□□□ 0.54
Hdac1O09106 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.43■□□□□ 0.54
Hdac1O09106 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hdac1O09106 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hdac1O09106 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hdac1O09106 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hdac1O09106 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hdac1O09106 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hdac1O09106 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.42■□□□□ 0.54
Hdac1O09106 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.42■□□□□ 0.54
Hdac1O09106 Gm17808-201ENSMUST00000200859 894 ntBASIC18.42■□□□□ 0.54
Hdac1O09106 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.42■□□□□ 0.54
Hdac1O09106 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.42■□□□□ 0.54
Hdac1O09106 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.42■□□□□ 0.54
Hdac1O09106 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hdac1O09106 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
Hdac1O09106 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hdac1O09106 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Gm29518-201ENSMUST00000190858 372 ntBASIC18.41■□□□□ 0.54
Hdac1O09106 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Hdac1O09106 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac1O09106 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Hdac1O09106 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hdac1O09106 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms