Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 UPF3AP3-201ENST00000420996 769 ntBASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 OR7E14P-202ENST00000530490 1290 ntBASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
LOC102724428A0A0B4J2F2 AL356309.3-201ENST00000624132 1934 ntBASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.33■■□□□ 1.32
LOC102724428A0A0B4J2F2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 AL591424.1-201ENST00000442569 1213 ntBASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 RNA5SP415-201ENST00000517246 115 ntBASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 Z83851.2-201ENST00000609564 659 ntBASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LOC102724428A0A0B4J2F2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 PKD1P6-201ENST00000343738 4769 ntBASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 RPSAP43-201ENST00000402237 625 ntBASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC010327.4-202ENST00000591484 748 ntBASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LOC102724428A0A0B4J2F2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 AC083906.6-201ENST00000641366 219 ntBASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
LOC102724428A0A0B4J2F2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LOC102724428A0A0B4J2F2 LINC00602-201ENST00000629776 2065 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms