Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 FLJ38576-201ENST00000623820 2459 ntBASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 YBX1P1-201ENST00000445822 960 ntBASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC1Q9Y5R8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAPPC1Q9Y5R8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms