Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 TP73-AS1-210ENST00000637775 1455 ntBASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 INTS4P1-201ENST00000438455 1935 ntBASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 AC125634.1-201ENST00000438758 1403 ntBASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC27.29■■□□□ 1.96
SHANK2Q9UPX8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SHANK2Q9UPX8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 MIR5100-201ENST00000579544 119 ntBASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 AL591684.3-201ENST00000605187 298 ntBASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.27■■□□□ 1.96
SHANK2Q9UPX8 MTCL1P1-201ENST00000446207 792 ntBASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SHANK2Q9UPX8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 IL9RP2-201ENST00000423948 1312 ntBASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 MED22-202ENST00000371999 987 ntTSL 3 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 RCN1P2-201ENST00000398357 915 ntBASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 SLC25A1P1-201ENST00000528351 927 ntBASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 AC092865.5-201ENST00000545435 363 ntBASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 AC148477.8-201ENST00000624298 468 ntBASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHANK2Q9UPX8 AC243591.1-201ENST00000452967 1364 ntBASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SHANK2Q9UPX8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 AC009533.2-201ENST00000543664 586 ntBASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 LINC02084-201ENST00000606069 1096 ntBASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms