Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCAF11Q99590 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCAF11Q99590 MED16-201ENST00000269814 1199 ntTSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC26.36■■□□□ 1.81
SCAF11Q99590 IMP4-203ENST00000409935 958 ntTSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC26.36■■□□□ 1.81
SCAF11Q99590 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC26.36■■□□□ 1.81
SCAF11Q99590 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC26.36■■□□□ 1.81
SCAF11Q99590 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.36■■□□□ 1.81
SCAF11Q99590 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SCAF11Q99590 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
SCAF11Q99590 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC26.35■■□□□ 1.81
SCAF11Q99590 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC26.35■■□□□ 1.81
SCAF11Q99590 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.35■■□□□ 1.81
SCAF11Q99590 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC26.35■■□□□ 1.81
SCAF11Q99590 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
SCAF11Q99590 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SCAF11Q99590 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCAF11Q99590 MTMR9LP-203ENST00000426597 1545 ntBASIC26.34■■□□□ 1.81
SCAF11Q99590 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SCAF11Q99590 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SCAF11Q99590 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC26.34■■□□□ 1.81
SCAF11Q99590 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCAF11Q99590 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC26.34■■□□□ 1.81
SCAF11Q99590 AC021087.4-201ENST00000563761 564 ntBASIC26.34■■□□□ 1.81
SCAF11Q99590 Z83851.2-201ENST00000609564 659 ntBASIC26.34■■□□□ 1.81
SCAF11Q99590 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SCAF11Q99590 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC26.33■■□□□ 1.81
SCAF11Q99590 AL161938.1-201ENST00000569833 2180 ntBASIC26.33■■□□□ 1.81
SCAF11Q99590 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 HEIH-201ENST00000623091 1652 ntBASIC26.33■■□□□ 1.81
SCAF11Q99590 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SCAF11Q99590 TP73-AS1-210ENST00000637775 1455 ntBASIC26.33■■□□□ 1.81
SCAF11Q99590 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC26.33■■□□□ 1.81
SCAF11Q99590 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC26.33■■□□□ 1.81
SCAF11Q99590 RPS2P28-201ENST00000314255 741 ntBASIC26.33■■□□□ 1.81
SCAF11Q99590 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC26.33■■□□□ 1.81
SCAF11Q99590 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC26.33■■□□□ 1.81
SCAF11Q99590 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SCAF11Q99590 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCAF11Q99590 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC26.33■■□□□ 1.81
SCAF11Q99590 AC112777.1-201ENST00000540175 1423 ntBASIC26.33■■□□□ 1.81
SCAF11Q99590 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC26.33■■□□□ 1.8
SCAF11Q99590 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.33■■□□□ 1.8
SCAF11Q99590 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC26.32■■□□□ 1.8
SCAF11Q99590 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF11Q99590 ANKRD20A8P-203ENST00000641373 517 ntBASIC26.32■■□□□ 1.8
SCAF11Q99590 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF11Q99590 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC26.32■■□□□ 1.8
SCAF11Q99590 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF11Q99590 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SCAF11Q99590 AC005332.7-201ENST00000614046 2005 ntBASIC26.31■■□□□ 1.8
SCAF11Q99590 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC26.31■■□□□ 1.8
SCAF11Q99590 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF11Q99590 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF11Q99590 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF11Q99590 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC26.31■■□□□ 1.8
SCAF11Q99590 SART3-203ENST00000546611 1184 ntBASIC26.31■■□□□ 1.8
SCAF11Q99590 AC012640.2-201ENST00000561606 901 ntBASIC26.31■■□□□ 1.8
SCAF11Q99590 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC26.31■■□□□ 1.8
SCAF11Q99590 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms