Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 TSPY21P-201ENST00000433481 731 ntBASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 MTMR9LP-203ENST00000426597 1545 ntBASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB3IPQ96QF0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 AC006116.8-202ENST00000587620 1550 ntBASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB3IPQ96QF0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB3IPQ96QF0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.96■□□□□ 0.46
RAB3IPQ96QF0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB3IPQ96QF0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 AC008556.1-201ENST00000610908 2040 ntBASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 C2orf69P4-201ENST00000565394 541 ntBASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IPQ96QF0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 AC027612.3-201ENST00000413684 1047 ntBASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IPQ96QF0 TERF1P5-201ENST00000477545 1207 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms