Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB40AQ8WXH6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40AQ8WXH6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40AQ8WXH6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 AL355355.2-201ENST00000442321 338 ntBASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAB40AQ8WXH6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RAB40AQ8WXH6 HEIH-201ENST00000623091 1652 ntBASIC16.21■□□□□ 0.18
RAB40AQ8WXH6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 AC139713.2-201ENST00000641328 2723 ntBASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TUBB8P6-201ENST00000436895 1288 ntBASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40AQ8WXH6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 AC135776.1-201ENST00000319817 2481 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 FAM197Y1-201ENST00000421178 764 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 KSR1P1-201ENST00000446298 240 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 KRT18P16-201ENST00000510337 1294 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 AC026471.5-201ENST00000615068 467 ntBASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40AQ8WXH6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms