Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.8■□□□□ 0.44
RIF1Q5UIP0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 ACTG1P14-201ENST00000446382 1122 ntBASIC17.8■□□□□ 0.44
RIF1Q5UIP0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 RNA5SP421-201ENST00000516864 134 ntBASIC17.8■□□□□ 0.44
RIF1Q5UIP0 AC109322.1-201ENST00000524499 1264 ntBASIC17.8■□□□□ 0.44
RIF1Q5UIP0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.8■□□□□ 0.44
RIF1Q5UIP0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 AC113404.2-201ENST00000507884 177 ntBASIC17.79■□□□□ 0.44
RIF1Q5UIP0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 CR383656.12-201ENST00000549567 513 ntBASIC17.79■□□□□ 0.44
RIF1Q5UIP0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 PMS2P4-201ENST00000412466 1052 ntBASIC17.79■□□□□ 0.44
RIF1Q5UIP0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RIF1Q5UIP0 GPR89P-201ENST00000407924 1495 ntBASIC17.79■□□□□ 0.44
RIF1Q5UIP0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 MIR661-201ENST00000384842 89 ntBASIC17.78■□□□□ 0.44
RIF1Q5UIP0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 PDPK2P-202ENST00000562415 1191 ntBASIC17.78■□□□□ 0.44
RIF1Q5UIP0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 TFAMP1-201ENST00000412727 736 ntBASIC17.78■□□□□ 0.44
RIF1Q5UIP0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 AC025678.2-201ENST00000562061 970 ntBASIC17.78■□□□□ 0.44
RIF1Q5UIP0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIF1Q5UIP0 RCC2P3-201ENST00000418112 1537 ntBASIC17.78■□□□□ 0.44
RIF1Q5UIP0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 AC125634.1-201ENST00000438758 1403 ntBASIC17.77■□□□□ 0.44
RIF1Q5UIP0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RIF1Q5UIP0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms