Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
GABREP78334 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 RNPS1P1-201ENST00000507437 918 ntBASIC17.48■□□□□ 0.39
GABREP78334 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.48■□□□□ 0.39
GABREP78334 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.48■□□□□ 0.39
GABREP78334 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.48■□□□□ 0.39
GABREP78334 BNIP3P18-201ENST00000593976 575 ntBASIC17.48■□□□□ 0.39
GABREP78334 AC008608.2-201ENST00000606089 416 ntBASIC17.48■□□□□ 0.39
GABREP78334 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.48■□□□□ 0.39
GABREP78334 AC148477.8-201ENST00000624298 468 ntBASIC17.48■□□□□ 0.39
GABREP78334 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GABREP78334 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GABREP78334 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.48■□□□□ 0.39
GABREP78334 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
GABREP78334 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.47■□□□□ 0.39
GABREP78334 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GABREP78334 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.47■□□□□ 0.39
GABREP78334 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.47■□□□□ 0.39
GABREP78334 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
GABREP78334 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.47■□□□□ 0.39
GABREP78334 MIR5100-201ENST00000579544 119 ntBASIC17.47■□□□□ 0.39
GABREP78334 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.47■□□□□ 0.39
GABREP78334 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GABREP78334 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.47■□□□□ 0.39
GABREP78334 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GABREP78334 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.46■□□□□ 0.39
GABREP78334 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GABREP78334 AC243591.1-201ENST00000452967 1364 ntBASIC17.46■□□□□ 0.39
GABREP78334 MIR940-201ENST00000401276 94 ntBASIC17.46■□□□□ 0.39
GABREP78334 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.46■□□□□ 0.39
GABREP78334 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
GABREP78334 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GABREP78334 AC106730.1-201ENST00000566722 1090 ntBASIC17.46■□□□□ 0.39
GABREP78334 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.46■□□□□ 0.39
GABREP78334 TERC-201ENST00000602385 541 ntBASIC17.46■□□□□ 0.39
GABREP78334 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GABREP78334 FEM1AP3-201ENST00000403722 1741 ntBASIC17.46■□□□□ 0.39
GABREP78334 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.46■□□□□ 0.39
GABREP78334 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
GABREP78334 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GABREP78334 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.45■□□□□ 0.38
GABREP78334 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.45■□□□□ 0.38
GABREP78334 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.45■□□□□ 0.38
GABREP78334 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.45■□□□□ 0.38
GABREP78334 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABREP78334 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GABREP78334 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.45■□□□□ 0.38
GABREP78334 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.45■□□□□ 0.38
GABREP78334 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GABREP78334 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms