Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.24■□□□□ 0.67
MTHFRP42898 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MTHFRP42898 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MTHFRP42898 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MTHFRP42898 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.24■□□□□ 0.67
MTHFRP42898 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MTHFRP42898 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MTHFRP42898 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.24■□□□□ 0.67
MTHFRP42898 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MTHFRP42898 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.23■□□□□ 0.67
MTHFRP42898 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.23■□□□□ 0.67
MTHFRP42898 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 AC008608.2-201ENST00000606089 416 ntBASIC19.23■□□□□ 0.67
MTHFRP42898 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.23■□□□□ 0.67
MTHFRP42898 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MTHFRP42898 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 PMS2P7-201ENST00000506558 1336 ntBASIC19.23■□□□□ 0.67
MTHFRP42898 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MTHFRP42898 FEM1AP3-201ENST00000403722 1741 ntBASIC19.22■□□□□ 0.67
MTHFRP42898 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.22■□□□□ 0.67
MTHFRP42898 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.22■□□□□ 0.67
MTHFRP42898 AC096582.2-201ENST00000510860 516 ntBASIC19.22■□□□□ 0.67
MTHFRP42898 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.22■□□□□ 0.67
MTHFRP42898 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.22■□□□□ 0.67
MTHFRP42898 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.22■□□□□ 0.67
MTHFRP42898 TERC-201ENST00000602385 541 ntBASIC19.22■□□□□ 0.67
MTHFRP42898 AC114341.1-201ENST00000618070 349 ntBASIC19.22■□□□□ 0.67
MTHFRP42898 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MTHFRP42898 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MTHFRP42898 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MTHFRP42898 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
MTHFRP42898 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MTHFRP42898 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.21■□□□□ 0.67
MTHFRP42898 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.21■□□□□ 0.67
MTHFRP42898 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.21■□□□□ 0.67
MTHFRP42898 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.21■□□□□ 0.67
MTHFRP42898 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.21■□□□□ 0.67
MTHFRP42898 AC148477.8-201ENST00000624298 468 ntBASIC19.21■□□□□ 0.67
MTHFRP42898 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.21■□□□□ 0.67
MTHFRP42898 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.21■□□□□ 0.67
MTHFRP42898 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MTHFRP42898 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
MTHFRP42898 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MTHFRP42898 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTHFRP42898 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.2■□□□□ 0.66
MTHFRP42898 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTHFRP42898 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
MTHFRP42898 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTHFRP42898 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
MTHFRP42898 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTHFRP42898 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MTHFRP42898 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MTHFRP42898 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MTHFRP42898 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
MTHFRP42898 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms