Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.38■□□□□ 0.69
GRIK1P39086 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.38■□□□□ 0.69
GRIK1P39086 TSSC2-201ENST00000450217 709 ntBASIC19.38■□□□□ 0.69
GRIK1P39086 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.38■□□□□ 0.69
GRIK1P39086 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 KRT8P26-201ENST00000534154 1276 ntBASIC19.38■□□□□ 0.69
GRIK1P39086 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.38■□□□□ 0.69
GRIK1P39086 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GRIK1P39086 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIK1P39086 AP000974.1-201ENST00000623909 2387 ntBASIC19.37■□□□□ 0.69
GRIK1P39086 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GRIK1P39086 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIK1P39086 Z83836.1-201ENST00000624605 1642 ntBASIC19.37■□□□□ 0.69
GRIK1P39086 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIK1P39086 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GRIK1P39086 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.37■□□□□ 0.69
GRIK1P39086 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 AC016734.2-201ENST00000624325 1377 ntBASIC19.37■□□□□ 0.69
GRIK1P39086 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.37■□□□□ 0.69
GRIK1P39086 HCG4P8-203ENST00000443049 980 ntBASIC19.37■□□□□ 0.69
GRIK1P39086 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIK1P39086 KRT18P56-201ENST00000507275 550 ntBASIC19.37■□□□□ 0.69
GRIK1P39086 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.37■□□□□ 0.69
GRIK1P39086 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.37■□□□□ 0.69
GRIK1P39086 AC005332.3-201ENST00000589904 676 ntBASIC19.37■□□□□ 0.69
GRIK1P39086 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GRIK1P39086 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIK1P39086 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIK1P39086 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GRIK1P39086 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.36■□□□□ 0.69
GRIK1P39086 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GRIK1P39086 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
GRIK1P39086 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.36■□□□□ 0.69
GRIK1P39086 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.36■□□□□ 0.69
GRIK1P39086 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.36■□□□□ 0.69
GRIK1P39086 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GRIK1P39086 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIK1P39086 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GRIK1P39086 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.35■□□□□ 0.69
GRIK1P39086 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GRIK1P39086 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.35■□□□□ 0.69
GRIK1P39086 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIK1P39086 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIK1P39086 ATP5G2P1-201ENST00000433580 426 ntBASIC19.35■□□□□ 0.69
GRIK1P39086 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIK1P39086 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.35■□□□□ 0.69
GRIK1P39086 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.35■□□□□ 0.69
GRIK1P39086 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.35■□□□□ 0.69
GRIK1P39086 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.35■□□□□ 0.69
GRIK1P39086 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.35■□□□□ 0.69
GRIK1P39086 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
GRIK1P39086 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIK1P39086 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIK1P39086 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GRIK1P39086 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GRIK1P39086 SDHAP2-201ENST00000455183 2001 ntBASIC19.34■□□□□ 0.69
GRIK1P39086 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIK1P39086 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIK1P39086 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GRIK1P39086 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
GRIK1P39086 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.34■□□□□ 0.69
GRIK1P39086 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIK1P39086 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GRIK1P39086 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.34■□□□□ 0.69
GRIK1P39086 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.34■□□□□ 0.69
GRIK1P39086 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms