Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.67■□□□□ 0.42
CCKBRP32239 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.67■□□□□ 0.42
CCKBRP32239 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCKBRP32239 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCKBRP32239 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.67■□□□□ 0.42
CCKBRP32239 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.67■□□□□ 0.42
CCKBRP32239 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.67■□□□□ 0.42
CCKBRP32239 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCKBRP32239 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.67■□□□□ 0.42
CCKBRP32239 AL592071.1-201ENST00000611956 408 ntBASIC17.67■□□□□ 0.42
CCKBRP32239 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 AC141586.3-201ENST00000562166 1838 ntBASIC17.67■□□□□ 0.42
CCKBRP32239 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCKBRP32239 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCKBRP32239 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.66■□□□□ 0.42
CCKBRP32239 AC079781.3-201ENST00000449110 356 ntBASIC17.66■□□□□ 0.42
CCKBRP32239 RN7SL606P-201ENST00000472779 293 ntBASIC17.66■□□□□ 0.42
CCKBRP32239 VENTXP7-201ENST00000475503 772 ntBASIC17.66■□□□□ 0.42
CCKBRP32239 AC106795.1-205ENST00000512851 1056 ntBASIC17.66■□□□□ 0.42
CCKBRP32239 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCKBRP32239 AC138894.3-201ENST00000603787 634 ntBASIC17.66■□□□□ 0.42
CCKBRP32239 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.66■□□□□ 0.42
CCKBRP32239 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCKBRP32239 AC120498.9-201ENST00000339021 3867 ntBASIC17.66■□□□□ 0.42
CCKBRP32239 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCKBRP32239 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCKBRP32239 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.65■□□□□ 0.42
CCKBRP32239 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 LINC00167-201ENST00000530583 1419 ntBASIC17.65■□□□□ 0.42
CCKBRP32239 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCKBRP32239 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCKBRP32239 IGHV3-47-201ENST00000425060 335 ntBASIC17.65■□□□□ 0.42
CCKBRP32239 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.65■□□□□ 0.42
CCKBRP32239 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCKBRP32239 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.65■□□□□ 0.42
CCKBRP32239 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.65■□□□□ 0.42
CCKBRP32239 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCKBRP32239 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCKBRP32239 AC099336.1-202ENST00000602961 463 ntBASIC17.65■□□□□ 0.42
CCKBRP32239 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.65■□□□□ 0.42
CCKBRP32239 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCKBRP32239 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCKBRP32239 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
CCKBRP32239 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCKBRP32239 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.64■□□□□ 0.41
CCKBRP32239 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.64■□□□□ 0.41
CCKBRP32239 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCKBRP32239 AC116562.4-201ENST00000641316 2276 ntBASIC17.64■□□□□ 0.41
CCKBRP32239 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCKBRP32239 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCKBRP32239 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCKBRP32239 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCKBRP32239 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.64■□□□□ 0.41
CCKBRP32239 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.64■□□□□ 0.41
CCKBRP32239 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCKBRP32239 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCKBRP32239 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.64■□□□□ 0.41
CCKBRP32239 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.64■□□□□ 0.41
CCKBRP32239 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.64■□□□□ 0.41
CCKBRP32239 AP002469.2-201ENST00000531724 424 ntBASIC17.64■□□□□ 0.41
CCKBRP32239 AL662844.1-201ENST00000546340 181 ntBASIC17.64■□□□□ 0.41
CCKBRP32239 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.64■□□□□ 0.41
CCKBRP32239 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.64■□□□□ 0.41
CCKBRP32239 AL353801.3-201ENST00000609898 542 ntBASIC17.64■□□□□ 0.41
CCKBRP32239 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms